Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015833662.1_cds_XP_016505330.1_18679
CDS Infomation

[gene=LOC107823228] [db_xref=GeneID:107823228] [protein=probable transcription factor PosF21] [protein_id=XP_016505330.1] [location=complement(join(25063..25331,25673..25757,25847..25979,26069..27312))] [gbkey=CDS]
Sequence

ATGGGGGGTGAGAGTGATGAAGCTAATACTGAGATGATGCGGAGACTTCAGTCATCATTT
GGGACATCATCTTCTTCCCTACAGAAACCCCAATATATTTTGACGAACCAACTTGACATA
CCTCAGTTGTCTACTTCCCAGTTTCATGGTCAAATGCGGCAGTTTTCTCCTAATTTCGGT
GTTGAAAATAGTACCAAAAGGGTTGGTGTGTCGCCTTCTCATCCACAAATGCCCCCTATT
TCGCCATATTCTCATATCCCAGTTAGCAGGCCAACAAGTCAGCAACACGGTATGCAGAGT
TTTACTACTCAAGGGTCCTCACATTCGCGTTCTTTATCACAACCATCGTTTTTCTCACTT
GATTCATTGCCACCCCTGAGCCCTTCACCGTATAAGGAATCCCTCTCGACGTTCATCTCT
GACCCTGTCGCAGCTGATGTGTCAATGGAGGATCGGGATGGAAATTCACATTCCTCATTG
CCGCCCTCACCTTTCTCTAGGTGTAATTCATCAAGGGCAGGAGAGAGTCTTCCTCCTCGT
AAGGCTCATAGAAGGTCTAACAGTGATATCCCATTTGGCTTTTCTACTATTATGCAGTCC
TCACTGCAGCTTGTTCCATCAAGGAGTCCTGCACAGTTGGTTAAACGTGAAGCTTATTGG
GATAAAAGCAATGATAAAAATGCTGAGGGAATGGGTGAAAGAAAATTTGAAGGAGAAGTC
GTGGATGACCTGTTTTCCGCATATATGAATTTGGACAATATTGAGTCATTGAACTCCTCA
GGTATAGATGAGAAGCAGGGTAATGAGAACCGTGAAGATTTAGATAGTAGAGCAAGCGGT
ACAAAGACTAATGGATGTGACAGCAGTGACAACGAAGCAACAAGCAGTGTGAATGACAGC
GGCAGCAGTATGCATACACTAGGGATGTCTTCTTCAACTGAGAAGAGGGAGGGGATCAAA
AGGAGTGCTGGGGGAGATATTGCTCCGACCGTCAGACACTACAGGAGTGTTTCGATGGAT
AGTTTTATGGGGAAGTTAAACTTTGGTGATGAGTCGCCGAAGTTGCCTCCATCCCCTGGA
CCCCACCATGGCCAACTCTCCCCCACAAATTCACTTGATGCGAATTCGGATAGTTTCAGT
TTGGAGTTTGGGAATGACGAATTCAATGGAGCTGAATTGAAGAAAATTATGGCGAATGAG
AAACTTGCTGAGATAGCCTTAGCTGATCCGAAACGTGCCAAAAGGATTTTGGCCAACCGT
CAGTCTGCTGCTCGTTCGAAAGAGCGAAAGATGAGGTATATTGCGGAGTTGGAACACAAG
GTACAAACCTTACAGACTGAAGCAACCACATTGTCTGCTCAACTCACTCTACTGCAGAGA
GATTCTTCTGGACTCACAAGCCAAAACAATGAGCTAAAATTCCGTCTGCAAGCTATGGAG
CAGCAGGCTCATCTCCGTGATGCTCTAAATGAAGCATTAACTGCTGAAGTTCAACGCTTG
AAGATTGCTACTGCTGAACTAAATGGAGATGCTGCAAAGTTTCAGCAGCTTTCTCTCAAT
CCCCAGATGTTCCACTTGCAGCGACAGCAGGCTACTCAACTAAGCATGCATCAGTTGCAA
CATCAGCAGCAACAACAACAAGAAAAAGCATCATCGCAACATCAACAGCATGCGCAGACA
AAGCCACAGCAGCTTAACAGCAGTGCACCTGCAAAGCACGAGTCGAAGTAG

Peptide Sequence

PEP ID

XP_016505330.1
PEP Infomation

PREDICTED: probable transcription factor PosF21 [Nicotiana tabacum]
Sequence

MGGESDEANTEMMRRLQSSFGTSSSSLQKPQYILTNQLDIPQLSTSQFHGQMRQFSPNFG
VENSTKRVGVSPSHPQMPPISPYSHIPVSRPTSQQHGMQSFTTQGSSHSRSLSQPSFFSL
DSLPPLSPSPYKESLSTFISDPVAADVSMEDRDGNSHSSLPPSPFSRCNSSRAGESLPPR
KAHRRSNSDIPFGFSTIMQSSLQLVPSRSPAQLVKREAYWDKSNDKNAEGMGERKFEGEV
VDDLFSAYMNLDNIESLNSSGIDEKQGNENREDLDSRASGTKTNGCDSSDNEATSSVNDS
GSSMHTLGMSSSTEKREGIKRSAGGDIAPTVRHYRSVSMDSFMGKLNFGDESPKLPPSPG
PHHGQLSPTNSLDANSDSFSLEFGNDEFNGAELKKIMANEKLAEIALADPKRAKRILANR
QSAARSKERKMRYIAELEHKVQTLQTEATTLSAQLTLLQRDSSGLTSQNNELKFRLQAME
QQAHLRDALNEALTAEVQRLKIATAELNGDAAKFQQLSLNPQMFHLQRQQATQLSMHQLQ
HQQQQQQEKASSQHQQHAQTKPQQLNSSAPAKHESK

Transcript Sequence

Gene sequence data has not been registered.